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Open Graph

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raw text

Home | Kappa Language Skip to main content Toggle navigation Kappa Language A rule-based language for modeling interaction networks Main navigation Home News Online UI Download Documentation KappaSphere Contact Partners (If you are a frequent visitor, keep an eye on the →News .) Welcome to Kappa Kappa is a rule-based language for modeling systems of interacting agents. While its current development is primarily motivated by molecular systems biology, its range of applications is quite broad. What does rule-based mean? Rule-based modeling languages for molecular biology, such as Kappa and BNGL , or organic chemistry, such as Mød , can be used to write mechanistic models of complex reaction systems. Consider a patch of the world that acts as a unit of interaction. Such a patch could be a single agent or a combination of agents. In systems biology applications, an agent would be a protein and a combination of agents would be a complex of non-...

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